Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.47■□□□□ 0.87
UBQLN1Q9UMX0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 AL138966.2-201ENST00000621997 464 ntBASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 AC093484.2-201ENST00000580996 2166 ntBASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 AC141586.3-201ENST00000562166 1838 ntBASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
UBQLN1Q9UMX0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
UBQLN1Q9UMX0 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 MIR1224-201ENST00000408193 85 ntBASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
UBQLN1Q9UMX0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 BX664615.1-201ENST00000443558 458 ntBASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 KRT8P3-201ENST00000519669 1449 ntBASIC20.44■□□□□ 0.86
UBQLN1Q9UMX0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.43■□□□□ 0.86
UBQLN1Q9UMX0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.43■□□□□ 0.86
UBQLN1Q9UMX0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.43■□□□□ 0.86
UBQLN1Q9UMX0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.43■□□□□ 0.86
UBQLN1Q9UMX0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBQLN1Q9UMX0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBQLN1Q9UMX0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.43■□□□□ 0.86
UBQLN1Q9UMX0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
UBQLN1Q9UMX0 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms