Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 FSCN1P1-201ENST00000568912 1481 ntBASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.86■□□□□ 0.77
PPARGC1AQ9UBK2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 AL596275.1-201ENST00000423464 877 ntBASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 AL355355.2-201ENST00000442321 338 ntBASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PPARGC1AQ9UBK2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 KRT17P2-201ENST00000300992 1314 ntBASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 RCC2P6-201ENST00000526625 1557 ntBASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 MESTP1-201ENST00000404287 994 ntBASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 B3GAT3P1-201ENST00000471720 806 ntBASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 MIR6786-201ENST00000616843 113 ntBASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 AC130371.2-201ENST00000619443 611 ntBASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 KRT8P41-201ENST00000533985 1514 ntBASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 SDHAP1-207ENST00000440850 2000 ntBASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PPARGC1AQ9UBK2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.83■□□□□ 0.77
PPARGC1AQ9UBK2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PPARGC1AQ9UBK2 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PPARGC1AQ9UBK2 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PPARGC1AQ9UBK2 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
PPARGC1AQ9UBK2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PPARGC1AQ9UBK2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PPARGC1AQ9UBK2 AC004951.3-201ENST00000418645 1148 ntBASIC19.83■□□□□ 0.77
PPARGC1AQ9UBK2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.83■□□□□ 0.77
PPARGC1AQ9UBK2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.83■□□□□ 0.77
PPARGC1AQ9UBK2 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.83■□□□□ 0.77
PPARGC1AQ9UBK2 AP003071.4-201ENST00000562276 1284 ntBASIC19.83■□□□□ 0.77
PPARGC1AQ9UBK2 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.83■□□□□ 0.76
PPARGC1AQ9UBK2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PPARGC1AQ9UBK2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PPARGC1AQ9UBK2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
PPARGC1AQ9UBK2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PPARGC1AQ9UBK2 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PPARGC1AQ9UBK2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PPARGC1AQ9UBK2 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PPARGC1AQ9UBK2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PPARGC1AQ9UBK2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 AC005332.7-201ENST00000614046 2005 ntBASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms