Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 AC069148.1-201ENST00000608741 768 ntBASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DNMT3BQ9UBC3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 SDHAP1-207ENST00000440850 2000 ntBASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 DUSP5P1-201ENST00000441325 1139 ntBASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 HCG4P8-203ENST00000443049 980 ntBASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
DNMT3BQ9UBC3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
DNMT3BQ9UBC3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 SPDYE13P-201ENST00000445314 798 ntBASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
DNMT3BQ9UBC3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms