Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CXXC1Q9P0U4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CXXC1Q9P0U4 AP005212.1-201ENST00000581547 1997 ntBASIC20.48■□□□□ 0.87
CXXC1Q9P0U4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CXXC1Q9P0U4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CXXC1Q9P0U4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CXXC1Q9P0U4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CXXC1Q9P0U4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 AC009237.14-201ENST00000609975 1594 ntBASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 AL590627.1-203ENST00000421194 1026 ntBASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 AC104819.1-201ENST00000504587 486 ntBASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 MIR3917-201ENST00000580971 93 ntBASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 MIR3180-5-201ENST00000583743 153 ntBASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 AL353801.3-201ENST00000609898 542 ntBASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CXXC1Q9P0U4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.46■□□□□ 0.87
CXXC1Q9P0U4 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
CXXC1Q9P0U4 Z83836.1-201ENST00000624605 1642 ntBASIC20.45■□□□□ 0.87
CXXC1Q9P0U4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 LINC00167-201ENST00000530583 1419 ntBASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 PENK-208ENST00000523051 772 ntTSL 5 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 AC074051.2-201ENST00000565115 352 ntBASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 AC112497.1-201ENST00000624824 639 ntBASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 AF228730.7-201ENST00000641842 219 ntBASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXXC1Q9P0U4 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CXXC1Q9P0U4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CXXC1Q9P0U4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CXXC1Q9P0U4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms