Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPHK1Q9NYA1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 EGLN1P1-201ENST00000531623 762 ntBASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPHK1Q9NYA1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 ECEL1P2-202ENST00000465689 757 ntBASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 AL023803.3-201ENST00000615559 522 ntBASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.37■□□□□ 0.53
SPHK1Q9NYA1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 IRX1P1-201ENST00000438849 1838 ntBASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SPHK1Q9NYA1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 KRT18P22-201ENST00000402024 1347 ntBASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 SLC25A1P2-201ENST00000430693 912 ntBASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.35■□□□□ 0.53
SPHK1Q9NYA1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms