Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 AC018470.1-201ENST00000624790 3129 ntBASIC17.77■□□□□ 0.44
RLIMQ9NVW2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 WIZP1-201ENST00000531444 2299 ntBASIC17.77■□□□□ 0.44
RLIMQ9NVW2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RLIMQ9NVW2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RLIMQ9NVW2 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RLIMQ9NVW2 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.77■□□□□ 0.43
RLIMQ9NVW2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.77■□□□□ 0.43
RLIMQ9NVW2 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RLIMQ9NVW2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RLIMQ9NVW2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RLIMQ9NVW2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 AL031598.1-201ENST00000561511 1773 ntBASIC17.76■□□□□ 0.43
RLIMQ9NVW2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 PRKY-204ENST00000533551 1019 ntBASIC17.76■□□□□ 0.43
RLIMQ9NVW2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.76■□□□□ 0.43
RLIMQ9NVW2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 AC026366.1-201ENST00000488803 879 ntBASIC17.75■□□□□ 0.43
RLIMQ9NVW2 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 KRT18P6-201ENST00000555540 1265 ntBASIC17.75■□□□□ 0.43
RLIMQ9NVW2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.75■□□□□ 0.43
RLIMQ9NVW2 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms