Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MIR718-201ENST00000390190 70 ntBASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BLOC1S4Q9NUP1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 AP006294.2-201ENST00000641667 209 ntBASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
BLOC1S4Q9NUP1 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 SNORA78-201ENST00000459373 127 ntBASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 AP003071.4-201ENST00000562276 1284 ntBASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 AC096733.2-201ENST00000609937 1394 ntBASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
BLOC1S4Q9NUP1 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.99
BLOC1S4Q9NUP1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
BLOC1S4Q9NUP1 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 AL355355.2-201ENST00000442321 338 ntBASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 DGCR10-201ENST00000609839 495 ntBASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
BLOC1S4Q9NUP1 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
BLOC1S4Q9NUP1 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms