Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.04■□□□□ 0.64
TREX1Q9NSU2 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC19.04■□□□□ 0.64
TREX1Q9NSU2 AC026271.3-201ENST00000571884 352 ntBASIC19.04■□□□□ 0.64
TREX1Q9NSU2 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TREX1Q9NSU2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.04■□□□□ 0.64
TREX1Q9NSU2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TREX1Q9NSU2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.04■□□□□ 0.64
TREX1Q9NSU2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.04■□□□□ 0.64
TREX1Q9NSU2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.04■□□□□ 0.64
TREX1Q9NSU2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TREX1Q9NSU2 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TREX1Q9NSU2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.04■□□□□ 0.64
TREX1Q9NSU2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.04■□□□□ 0.64
TREX1Q9NSU2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 AC073195.1-201ENST00000607241 877 ntBASIC19.03■□□□□ 0.64
TREX1Q9NSU2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TREX1Q9NSU2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 RNF165-205ENST00000588679 2904 ntBASIC19.02■□□□□ 0.64
TREX1Q9NSU2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 AC098590.1-201ENST00000468126 897 ntBASIC19.02■□□□□ 0.64
TREX1Q9NSU2 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 PRSS44-201ENST00000515154 1146 ntBASIC19.02■□□□□ 0.64
TREX1Q9NSU2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 FAM197Y4-202ENST00000622692 608 ntBASIC19.02■□□□□ 0.64
TREX1Q9NSU2 CR392000.1-201ENST00000624770 1228 ntBASIC19.02■□□□□ 0.64
TREX1Q9NSU2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
TREX1Q9NSU2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.02■□□□□ 0.63
TREX1Q9NSU2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.02■□□□□ 0.63
TREX1Q9NSU2 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 AC004951.3-201ENST00000418645 1148 ntBASIC19.01■□□□□ 0.63
TREX1Q9NSU2 AC008040.2-201ENST00000461049 708 ntBASIC19.01■□□□□ 0.63
TREX1Q9NSU2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 AL031985.4-201ENST00000642138 673 ntBASIC19.01■□□□□ 0.63
TREX1Q9NSU2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TREX1Q9NSU2 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19■□□□□ 0.63
TREX1Q9NSU2 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
TREX1Q9NSU2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TREX1Q9NSU2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TREX1Q9NSU2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TREX1Q9NSU2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TREX1Q9NSU2 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TREX1Q9NSU2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19■□□□□ 0.63
TREX1Q9NSU2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19■□□□□ 0.63
TREX1Q9NSU2 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19■□□□□ 0.63
TREX1Q9NSU2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19■□□□□ 0.63
TREX1Q9NSU2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19■□□□□ 0.63
TREX1Q9NSU2 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19■□□□□ 0.63
TREX1Q9NSU2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19■□□□□ 0.63
TREX1Q9NSU2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19■□□□□ 0.63
TREX1Q9NSU2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TREX1Q9NSU2 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
TREX1Q9NSU2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
TREX1Q9NSU2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
TREX1Q9NSU2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TREX1Q9NSU2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms