Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 PRSS44-201ENST00000515154 1146 ntBASIC18.12■□□□□ 0.49
ZNF304Q9HCX3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.12■□□□□ 0.49
ZNF304Q9HCX3 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.12■□□□□ 0.49
ZNF304Q9HCX3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.12■□□□□ 0.49
ZNF304Q9HCX3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF304Q9HCX3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF304Q9HCX3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.12■□□□□ 0.49
ZNF304Q9HCX3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF304Q9HCX3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF304Q9HCX3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF304Q9HCX3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF304Q9HCX3 AC026471.1-201ENST00000564629 3026 ntBASIC18.12■□□□□ 0.49
ZNF304Q9HCX3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ZNF304Q9HCX3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ZNF304Q9HCX3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 AC125437.2-201ENST00000625180 2167 ntBASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 SLC25A1P2-201ENST00000430693 912 ntBASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 CCR12P-201ENST00000446203 998 ntBASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 AC116562.4-202ENST00000641738 218 ntBASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ZNF304Q9HCX3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 SDHAP1-207ENST00000440850 2000 ntBASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 KRT8P11-201ENST00000409686 1436 ntBASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF304Q9HCX3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 SLC25A3P1-201ENST00000443844 931 ntBASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 ECEL1P2-202ENST00000465689 757 ntBASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF304Q9HCX3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
ZNF304Q9HCX3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF304Q9HCX3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms