Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
ZFYVE28Q9HCC9 MRPL3P1-201ENST00000400109 1033 ntBASIC21.8■■□□□ 1.08
ZFYVE28Q9HCC9 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZFYVE28Q9HCC9 MCCD1P1-208ENST00000445732 328 ntBASIC21.8■■□□□ 1.08
ZFYVE28Q9HCC9 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.8■■□□□ 1.08
ZFYVE28Q9HCC9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.8■■□□□ 1.08
ZFYVE28Q9HCC9 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
ZFYVE28Q9HCC9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.8■■□□□ 1.08
ZFYVE28Q9HCC9 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.8■■□□□ 1.08
ZFYVE28Q9HCC9 AC112497.1-201ENST00000624824 639 ntBASIC21.8■■□□□ 1.08
ZFYVE28Q9HCC9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.8■■□□□ 1.08
ZFYVE28Q9HCC9 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZFYVE28Q9HCC9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
ZFYVE28Q9HCC9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 DFFB-203ENST00000341385 572 ntTSL 5 BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 AC120114.3-201ENST00000611923 658 ntBASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 BX640515.1-201ENST00000617215 977 ntBASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
ZFYVE28Q9HCC9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 BAALC-202ENST00000306391 243 ntTSL 5 BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 BAALC-204ENST00000330955 222 ntTSL 5 BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 AC139530.3-201ENST00000620344 690 ntBASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
ZFYVE28Q9HCC9 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 KRT16P4-201ENST00000453883 522 ntBASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 AC138894.3-201ENST00000603787 634 ntBASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 AL353801.3-201ENST00000609898 542 ntBASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.77■■□□□ 1.08
ZFYVE28Q9HCC9 HLA-A-201ENST00000376802 1334 ntBASIC21.77■■□□□ 1.07
ZFYVE28Q9HCC9 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC21.77■■□□□ 1.07
ZFYVE28Q9HCC9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
ZFYVE28Q9HCC9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.76■■□□□ 1.07
ZFYVE28Q9HCC9 AC074051.2-201ENST00000565115 352 ntBASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms