Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 TSPY23P-201ENST00000440136 739 ntBASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 UNC93B5-201ENST00000530315 699 ntBASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TUBB1Q9H4B7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TUBB1Q9H4B7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TUBB1Q9H4B7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TUBB1Q9H4B7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 TSPY21P-201ENST00000433481 731 ntBASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 AL160286.2-201ENST00000567150 934 ntBASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 C1QL1P1-201ENST00000568105 661 ntBASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 NBPF21P-201ENST00000425093 1451 ntBASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.38■□□□□ 0.53
TUBB1Q9H4B7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.37■□□□□ 0.53
TUBB1Q9H4B7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms