Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.17■□□□□ 0.5
VCX3BQ9H321 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.17■□□□□ 0.5
VCX3BQ9H321 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.17■□□□□ 0.5
VCX3BQ9H321 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
VCX3BQ9H321 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.17■□□□□ 0.5
VCX3BQ9H321 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VCX3BQ9H321 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.16■□□□□ 0.5
VCX3BQ9H321 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.16■□□□□ 0.5
VCX3BQ9H321 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.16■□□□□ 0.5
VCX3BQ9H321 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
VCX3BQ9H321 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.16■□□□□ 0.5
VCX3BQ9H321 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VCX3BQ9H321 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
VCX3BQ9H321 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.16■□□□□ 0.5
VCX3BQ9H321 BX842568.3-201ENST00000418104 571 ntBASIC18.16■□□□□ 0.5
VCX3BQ9H321 UNC93B8-201ENST00000511903 705 ntBASIC18.16■□□□□ 0.5
VCX3BQ9H321 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.16■□□□□ 0.5
VCX3BQ9H321 AL358852.1-201ENST00000623174 1268 ntBASIC18.16■□□□□ 0.5
VCX3BQ9H321 AC012354.3-201ENST00000623734 483 ntBASIC18.16■□□□□ 0.5
VCX3BQ9H321 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.16■□□□□ 0.5
VCX3BQ9H321 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VCX3BQ9H321 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
VCX3BQ9H321 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.16■□□□□ 0.5
VCX3BQ9H321 PTBP1P-201ENST00000554374 1601 ntBASIC18.16■□□□□ 0.5
VCX3BQ9H321 LINC00896-202ENST00000609602 2128 ntBASIC18.16■□□□□ 0.5
VCX3BQ9H321 PHGDH-210ENST00000641115 1638 ntBASIC18.16■□□□□ 0.5
VCX3BQ9H321 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
VCX3BQ9H321 KRT8P20-201ENST00000423953 1409 ntBASIC18.15■□□□□ 0.5
VCX3BQ9H321 ANO7L1-203ENST00000602586 1720 ntBASIC18.15■□□□□ 0.5
VCX3BQ9H321 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.15■□□□□ 0.5
VCX3BQ9H321 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VCX3BQ9H321 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
VCX3BQ9H321 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCX3BQ9H321 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCX3BQ9H321 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCX3BQ9H321 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCX3BQ9H321 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
VCX3BQ9H321 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.15■□□□□ 0.5
VCX3BQ9H321 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.15■□□□□ 0.5
VCX3BQ9H321 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.15■□□□□ 0.5
VCX3BQ9H321 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCX3BQ9H321 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
VCX3BQ9H321 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.15■□□□□ 0.5
VCX3BQ9H321 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCX3BQ9H321 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
VCX3BQ9H321 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCX3BQ9H321 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VCX3BQ9H321 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
VCX3BQ9H321 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VCX3BQ9H321 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
VCX3BQ9H321 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VCX3BQ9H321 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
VCX3BQ9H321 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCX3BQ9H321 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCX3BQ9H321 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCX3BQ9H321 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCX3BQ9H321 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.14■□□□□ 0.49
VCX3BQ9H321 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
VCX3BQ9H321 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
VCX3BQ9H321 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCX3BQ9H321 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.14■□□□□ 0.49
VCX3BQ9H321 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCX3BQ9H321 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCX3BQ9H321 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCX3BQ9H321 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.14■□□□□ 0.49
VCX3BQ9H321 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.14■□□□□ 0.49
VCX3BQ9H321 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCX3BQ9H321 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
VCX3BQ9H321 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCX3BQ9H321 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VCX3BQ9H321 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VCX3BQ9H321 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCX3BQ9H321 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
VCX3BQ9H321 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.14■□□□□ 0.49
VCX3BQ9H321 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VCX3BQ9H321 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
VCX3BQ9H321 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
VCX3BQ9H321 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms