Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 RAP2CP1-201ENST00000605103 478 ntBASIC19.19■□□□□ 0.66
VPS11Q9H270 AL121832.2-201ENST00000610979 668 ntBASIC19.19■□□□□ 0.66
VPS11Q9H270 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.19■□□□□ 0.66
VPS11Q9H270 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.19■□□□□ 0.66
VPS11Q9H270 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
VPS11Q9H270 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS11Q9H270 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS11Q9H270 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
VPS11Q9H270 AC018470.1-201ENST00000624790 3129 ntBASIC19.19■□□□□ 0.66
VPS11Q9H270 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.19■□□□□ 0.66
VPS11Q9H270 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS11Q9H270 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
VPS11Q9H270 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.19■□□□□ 0.66
VPS11Q9H270 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.19■□□□□ 0.66
VPS11Q9H270 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
VPS11Q9H270 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS11Q9H270 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS11Q9H270 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
VPS11Q9H270 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS11Q9H270 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS11Q9H270 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS11Q9H270 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS11Q9H270 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS11Q9H270 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS11Q9H270 AC006970.2-201ENST00000450065 779 ntBASIC19.18■□□□□ 0.66
VPS11Q9H270 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS11Q9H270 AC091874.3-201ENST00000512672 1195 ntBASIC19.18■□□□□ 0.66
VPS11Q9H270 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS11Q9H270 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS11Q9H270 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.18■□□□□ 0.66
VPS11Q9H270 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.18■□□□□ 0.66
VPS11Q9H270 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
VPS11Q9H270 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.18■□□□□ 0.66
VPS11Q9H270 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS11Q9H270 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS11Q9H270 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.18■□□□□ 0.66
VPS11Q9H270 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS11Q9H270 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
VPS11Q9H270 NOC2LP2-201ENST00000407594 1944 ntBASIC19.17■□□□□ 0.66
VPS11Q9H270 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS11Q9H270 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS11Q9H270 AL133373.2-201ENST00000623187 2828 ntBASIC19.17■□□□□ 0.66
VPS11Q9H270 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS11Q9H270 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS11Q9H270 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS11Q9H270 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.17■□□□□ 0.66
VPS11Q9H270 AC092118.2-201ENST00000613495 667 ntBASIC19.17■□□□□ 0.66
VPS11Q9H270 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
VPS11Q9H270 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS11Q9H270 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.17■□□□□ 0.66
VPS11Q9H270 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
VPS11Q9H270 KRT8P8-201ENST00000434750 1448 ntBASIC19.17■□□□□ 0.66
VPS11Q9H270 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.17■□□□□ 0.66
VPS11Q9H270 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.17■□□□□ 0.66
VPS11Q9H270 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS11Q9H270 BCL2-203ENST00000589955 5011 ntBASIC19.16■□□□□ 0.66
VPS11Q9H270 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS11Q9H270 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS11Q9H270 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS11Q9H270 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS11Q9H270 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS11Q9H270 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
VPS11Q9H270 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS11Q9H270 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS11Q9H270 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS11Q9H270 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS11Q9H270 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS11Q9H270 AL121906.2-201ENST00000621597 723 ntBASIC19.16■□□□□ 0.66
VPS11Q9H270 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
VPS11Q9H270 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS11Q9H270 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS11Q9H270 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.16■□□□□ 0.66
VPS11Q9H270 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS11Q9H270 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS11Q9H270 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
VPS11Q9H270 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
VPS11Q9H270 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS11Q9H270 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.16■□□□□ 0.66
VPS11Q9H270 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
VPS11Q9H270 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
VPS11Q9H270 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
VPS11Q9H270 AC092368.3-202ENST00000574180 1591 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms