Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 Z82202.1-201ENST00000623446 1880 ntBASIC19.79■□□□□ 0.76
RNF38Q9H0F5 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.79■□□□□ 0.76
RNF38Q9H0F5 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF38Q9H0F5 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF38Q9H0F5 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 FAM8A6P-201ENST00000407496 1135 ntBASIC19.77■□□□□ 0.76
RNF38Q9H0F5 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 AC087388.1-201ENST00000571370 1112 ntBASIC19.77■□□□□ 0.76
RNF38Q9H0F5 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 AL023973.1-201ENST00000624619 620 ntBASIC19.77■□□□□ 0.76
RNF38Q9H0F5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF38Q9H0F5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RNF38Q9H0F5 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
RNF38Q9H0F5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
RNF38Q9H0F5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.76■□□□□ 0.75
RNF38Q9H0F5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 AL441883.1-201ENST00000566170 1045 ntBASIC19.76■□□□□ 0.75
RNF38Q9H0F5 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF38Q9H0F5 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF38Q9H0F5 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms