Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 AC141586.3-201ENST00000562166 1838 ntBASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
LCE3DQ9BYE3 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC5.14□□□□□ -1.59
LCE3DQ9BYE3 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms