Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 SDHAP1-207ENST00000440850 2000 ntBASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 WIZP1-201ENST00000531444 2299 ntBASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 IRX1P1-201ENST00000438849 1838 ntBASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.23■□□□□ 0.51
THUMPD3Q9BV44 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 AC104417.2-201ENST00000562989 1793 ntBASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 AC026471.1-201ENST00000564629 3026 ntBASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 AC005829.2-201ENST00000571422 1056 ntBASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 AC133041.1-202ENST00000642053 222 ntBASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 AL031598.1-201ENST00000561511 1773 ntBASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 Z98044.1-201ENST00000632503 1764 ntBASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
THUMPD3Q9BV44 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 AC005082.1-201ENST00000413042 2259 ntBASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 ID1-201ENST00000376105 1233 ntBASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 AL355802.2-201ENST00000402069 882 ntBASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 AC069152.1-201ENST00000438030 544 ntBASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 MYC-209ENST00000641252 345 ntBASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
THUMPD3Q9BV44 FP475955.4-201ENST00000623131 1990 ntBASIC18.21■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms