Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 AL356309.3-201ENST00000624132 1934 ntBASIC11.36□□□□□ -0.59
LIMD2Q9BT23 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 AC092368.3-202ENST00000574180 1591 ntBASIC11.36□□□□□ -0.59
LIMD2Q9BT23 AC116351.2-201ENST00000606540 1585 ntBASIC11.36□□□□□ -0.59
LIMD2Q9BT23 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC11.36□□□□□ -0.59
LIMD2Q9BT23 PCDHAC2-203ENST00000615316 3011 ntBASIC11.35□□□□□ -0.59
LIMD2Q9BT23 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 RHEB-204ENST00000472642 900 ntTSL 3 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 TK2-208ENST00000545043 1120 ntTSL 2 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 AC060766.5-201ENST00000590539 871 ntBASIC11.35□□□□□ -0.59
LIMD2Q9BT23 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 WT1-AS_3.1-201ENST00000613262 234 ntBASIC11.35□□□□□ -0.59
LIMD2Q9BT23 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LIMD2Q9BT23 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 AC018553.1-201ENST00000616682 1458 ntBASIC11.34□□□□□ -0.59
LIMD2Q9BT23 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 PPP1R14BP2-201ENST00000426284 444 ntBASIC11.34□□□□□ -0.59
LIMD2Q9BT23 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC11.34□□□□□ -0.59
LIMD2Q9BT23 REXO2-208ENST00000539754 791 ntTSL 2 BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms