Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 AL023875.1-201ENST00000640777 796 ntBASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HERPUD2Q9BSE4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 PRKY-204ENST00000533551 1019 ntBASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.77■□□□□ 0.76
HERPUD2Q9BSE4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
HERPUD2Q9BSE4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 AC083906.6-201ENST00000641366 219 ntBASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 ANO7L1-203ENST00000602586 1720 ntBASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.76■□□□□ 0.75
HERPUD2Q9BSE4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 KRT17P3-201ENST00000420566 1262 ntBASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 Z85996.1-201ENST00000494644 937 ntBASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 AC073648.6-201ENST00000641589 218 ntBASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms