Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
S1PR3Q99500 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
S1PR3Q99500 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
S1PR3Q99500 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC15.75■□□□□ 0.11
S1PR3Q99500 AC104417.2-201ENST00000562989 1793 ntBASIC15.75■□□□□ 0.11
S1PR3Q99500 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
S1PR3Q99500 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
S1PR3Q99500 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.74■□□□□ 0.11
S1PR3Q99500 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.74■□□□□ 0.11
S1PR3Q99500 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
S1PR3Q99500 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.74■□□□□ 0.11
S1PR3Q99500 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.74■□□□□ 0.11
S1PR3Q99500 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
S1PR3Q99500 TEX21P-204ENST00000641479 1693 ntBASIC15.74■□□□□ 0.11
S1PR3Q99500 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 NBPF21P-201ENST00000425093 1451 ntBASIC15.74■□□□□ 0.11
S1PR3Q99500 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
S1PR3Q99500 AC093503.3-201ENST00000624917 2352 ntBASIC15.74■□□□□ 0.11
S1PR3Q99500 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.74■□□□□ 0.11
S1PR3Q99500 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
S1PR3Q99500 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
S1PR3Q99500 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.74■□□□□ 0.11
S1PR3Q99500 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.74■□□□□ 0.11
S1PR3Q99500 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC15.74■□□□□ 0.11
S1PR3Q99500 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC15.74■□□□□ 0.11
S1PR3Q99500 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
S1PR3Q99500 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.74■□□□□ 0.11
S1PR3Q99500 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.74■□□□□ 0.11
S1PR3Q99500 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
S1PR3Q99500 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
S1PR3Q99500 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.73■□□□□ 0.11
S1PR3Q99500 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.73■□□□□ 0.11
S1PR3Q99500 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 AL161938.1-201ENST00000569833 2180 ntBASIC15.73■□□□□ 0.11
S1PR3Q99500 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
S1PR3Q99500 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.73■□□□□ 0.11
S1PR3Q99500 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
S1PR3Q99500 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 AC128676.1-201ENST00000454392 318 ntBASIC15.73■□□□□ 0.11
S1PR3Q99500 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.73■□□□□ 0.11
S1PR3Q99500 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
S1PR3Q99500 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.73■□□□□ 0.11
S1PR3Q99500 AC073648.6-201ENST00000641589 218 ntBASIC15.73■□□□□ 0.11
S1PR3Q99500 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.73■□□□□ 0.11
S1PR3Q99500 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.73■□□□□ 0.11
S1PR3Q99500 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
S1PR3Q99500 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
S1PR3Q99500 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
S1PR3Q99500 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.72■□□□□ 0.11
S1PR3Q99500 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
S1PR3Q99500 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
S1PR3Q99500 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC15.72■□□□□ 0.11
S1PR3Q99500 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
S1PR3Q99500 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
S1PR3Q99500 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
S1PR3Q99500 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
S1PR3Q99500 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
S1PR3Q99500 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
S1PR3Q99500 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
S1PR3Q99500 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
S1PR3Q99500 IRX5-204ENST00000560154 879 ntTSL 5 BASIC15.72■□□□□ 0.11
S1PR3Q99500 AC233263.1-201ENST00000578059 224 ntBASIC15.72■□□□□ 0.11
S1PR3Q99500 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
S1PR3Q99500 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.72■□□□□ 0.11
S1PR3Q99500 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
S1PR3Q99500 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms