Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
CITED4Q96RK1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CITED4Q96RK1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
CITED4Q96RK1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
CITED4Q96RK1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.31■□□□□ 0.2
CITED4Q96RK1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 MST1L-201ENST00000442552 2185 ntBASIC16.31■□□□□ 0.2
CITED4Q96RK1 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.31■□□□□ 0.2
CITED4Q96RK1 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.31■□□□□ 0.2
CITED4Q96RK1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.31■□□□□ 0.2
CITED4Q96RK1 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.31■□□□□ 0.2
CITED4Q96RK1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CITED4Q96RK1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.31■□□□□ 0.2
CITED4Q96RK1 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.3■□□□□ 0.2
CITED4Q96RK1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CITED4Q96RK1 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CITED4Q96RK1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.3■□□□□ 0.2
CITED4Q96RK1 NFIC-211ENST00000641145 8399 ntBASIC16.3■□□□□ 0.2
CITED4Q96RK1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CITED4Q96RK1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC16.3■□□□□ 0.2
CITED4Q96RK1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CITED4Q96RK1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC16.3■□□□□ 0.2
CITED4Q96RK1 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.3■□□□□ 0.2
CITED4Q96RK1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 IGHV3-19-201ENST00000521488 291 ntBASIC16.3■□□□□ 0.2
CITED4Q96RK1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CITED4Q96RK1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.3■□□□□ 0.2
CITED4Q96RK1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CITED4Q96RK1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CITED4Q96RK1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CITED4Q96RK1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 AC123595.1-201ENST00000440769 1046 ntBASIC16.29■□□□□ 0.2
CITED4Q96RK1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 AC079089.2-201ENST00000531211 1277 ntBASIC16.29■□□□□ 0.2
CITED4Q96RK1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 AL358852.1-201ENST00000623174 1268 ntBASIC16.29■□□□□ 0.2
CITED4Q96RK1 AC092437.1-201ENST00000624794 1048 ntBASIC16.29■□□□□ 0.2
CITED4Q96RK1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 OR6D1P-203ENST00000641209 4860 ntBASIC16.29■□□□□ 0.2
CITED4Q96RK1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.29■□□□□ 0.2
CITED4Q96RK1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CITED4Q96RK1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms