Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
GAFA1Q96PS6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 AC096733.2-201ENST00000609937 1394 ntBASIC15.88■□□□□ 0.13
GAFA1Q96PS6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
GAFA1Q96PS6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 AL049812.1-201ENST00000432563 2267 ntBASIC15.87■□□□□ 0.13
GAFA1Q96PS6 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 AC079598.2-202ENST00000546624 1451 ntBASIC15.87■□□□□ 0.13
GAFA1Q96PS6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 MFAP1P1-201ENST00000442257 1255 ntBASIC15.87■□□□□ 0.13
GAFA1Q96PS6 TSPY15P-201ENST00000457163 923 ntBASIC15.87■□□□□ 0.13
GAFA1Q96PS6 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 AP000525.1-201ENST00000608286 694 ntBASIC15.87■□□□□ 0.13
GAFA1Q96PS6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
GAFA1Q96PS6 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 CRYGFP-201ENST00000418459 633 ntBASIC15.86■□□□□ 0.13
GAFA1Q96PS6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.86■□□□□ 0.13
GAFA1Q96PS6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
GAFA1Q96PS6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
GAFA1Q96PS6 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms