Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 AP000997.3-201ENST00000623333 2250 ntBASIC14.4□□□□□ -0.1
AP1S3Q96PC3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
AP1S3Q96PC3 AC019069.1-201ENST00000610008 1333 ntBASIC14.4□□□□□ -0.1
AP1S3Q96PC3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 COX20-201ENST00000366528 568 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC14.39□□□□□ -0.11
AP1S3Q96PC3 AP001271.2-201ENST00000624018 1556 ntBASIC14.39□□□□□ -0.11
AP1S3Q96PC3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 RALB-208ENST00000631312 311 ntTSL 5 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 AC012313.1-201ENST00000593393 3059 ntBASIC14.38□□□□□ -0.11
AP1S3Q96PC3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
AP1S3Q96PC3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.37□□□□□ -0.11
AP1S3Q96PC3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms