Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CASD1Q96PB1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CASD1Q96PB1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.36■□□□□ 0.85
CASD1Q96PB1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CASD1Q96PB1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CASD1Q96PB1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.35■□□□□ 0.85
CASD1Q96PB1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CASD1Q96PB1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CASD1Q96PB1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CASD1Q96PB1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.35■□□□□ 0.85
CASD1Q96PB1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.35■□□□□ 0.85
CASD1Q96PB1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.35■□□□□ 0.85
CASD1Q96PB1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CASD1Q96PB1 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.35■□□□□ 0.85
CASD1Q96PB1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.35■□□□□ 0.85
CASD1Q96PB1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CASD1Q96PB1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.35■□□□□ 0.85
CASD1Q96PB1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CASD1Q96PB1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CASD1Q96PB1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASD1Q96PB1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASD1Q96PB1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASD1Q96PB1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASD1Q96PB1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASD1Q96PB1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CASD1Q96PB1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CASD1Q96PB1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASD1Q96PB1 SEC1P-202ENST00000473944 940 ntBASIC20.34■□□□□ 0.85
CASD1Q96PB1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.34■□□□□ 0.85
CASD1Q96PB1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASD1Q96PB1 AC012313.10-201ENST00000623509 926 ntBASIC20.34■□□□□ 0.85
CASD1Q96PB1 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CASD1Q96PB1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASD1Q96PB1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CASD1Q96PB1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CASD1Q96PB1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CASD1Q96PB1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.34■□□□□ 0.85
CASD1Q96PB1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CASD1Q96PB1 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
CASD1Q96PB1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CASD1Q96PB1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CASD1Q96PB1 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.33■□□□□ 0.85
CASD1Q96PB1 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CASD1Q96PB1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CASD1Q96PB1 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.33■□□□□ 0.85
CASD1Q96PB1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CASD1Q96PB1 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.33■□□□□ 0.85
CASD1Q96PB1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CASD1Q96PB1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.33■□□□□ 0.85
CASD1Q96PB1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.33■□□□□ 0.84
CASD1Q96PB1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CASD1Q96PB1 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CASD1Q96PB1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.33■□□□□ 0.84
CASD1Q96PB1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.33■□□□□ 0.84
CASD1Q96PB1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CASD1Q96PB1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASD1Q96PB1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASD1Q96PB1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASD1Q96PB1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASD1Q96PB1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASD1Q96PB1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASD1Q96PB1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 AC092119.3-201ENST00000612618 583 ntBASIC20.32■□□□□ 0.84
CASD1Q96PB1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CASD1Q96PB1 AC079602.3-201ENST00000623931 403 ntBASIC20.32■□□□□ 0.84
CASD1Q96PB1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASD1Q96PB1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CASD1Q96PB1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASD1Q96PB1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CASD1Q96PB1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.32■□□□□ 0.84
CASD1Q96PB1 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.31■□□□□ 0.84
CASD1Q96PB1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.31■□□□□ 0.84
CASD1Q96PB1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.31■□□□□ 0.84
CASD1Q96PB1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.31■□□□□ 0.84
CASD1Q96PB1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CASD1Q96PB1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms