Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 AC091390.4-202ENST00000476426 537 ntBASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.65■□□□□ 0.58
PDLIM5Q96HC4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDLIM5Q96HC4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDLIM5Q96HC4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDLIM5Q96HC4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDLIM5Q96HC4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PDLIM5Q96HC4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 AC004951.3-201ENST00000418645 1148 ntBASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 AC130371.2-201ENST00000619443 611 ntBASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 AL512353.2-201ENST00000448759 1962 ntBASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 AL135905.2-201ENST00000584934 1404 ntBASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PDLIM5Q96HC4 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 PRORSD1P-201ENST00000295112 541 ntBASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 FAM197Y4-202ENST00000622692 608 ntBASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PDLIM5Q96HC4 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 CR392000.1-201ENST00000624770 1228 ntBASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PDLIM5Q96HC4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PDLIM5Q96HC4 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms