Protein–RNA interactions for Protein: Q96CP6

GRAMD1A, GRAM domain-containing protein 1A, humanhuman

Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1AQ96CP6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
GRAMD1AQ96CP6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
GRAMD1AQ96CP6 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GRAMD1AQ96CP6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
GRAMD1AQ96CP6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GRAMD1AQ96CP6 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GRAMD1AQ96CP6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.56■□□□□ 0.72
GRAMD1AQ96CP6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GRAMD1AQ96CP6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GRAMD1AQ96CP6 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GRAMD1AQ96CP6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
GRAMD1AQ96CP6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 AL023875.1-201ENST00000640777 796 ntBASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 AC020763.4-201ENST00000623414 4170 ntBASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GRAMD1AQ96CP6 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 AIRN-201ENST00000601203 4374 ntBASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.53■□□□□ 0.72
GRAMD1AQ96CP6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
GRAMD1AQ96CP6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.52■□□□□ 0.72
GRAMD1AQ96CP6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
GRAMD1AQ96CP6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms