Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 CKBP1-201ENST00000565489 1086 ntBASIC16.82■□□□□ 0.28
TMEM54Q969K7 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 AC006333.2-201ENST00000607957 2099 ntBASIC16.82■□□□□ 0.28
TMEM54Q969K7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
TMEM54Q969K7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TMEM54Q969K7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM54Q969K7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM54Q969K7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM54Q969K7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM54Q969K7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM54Q969K7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM54Q969K7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TMEM54Q969K7 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM54Q969K7 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM54Q969K7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM54Q969K7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM54Q969K7 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM54Q969K7 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
TMEM54Q969K7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.81■□□□□ 0.28
TMEM54Q969K7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC16.81■□□□□ 0.28
TMEM54Q969K7 AL355355.2-201ENST00000442321 338 ntBASIC16.81■□□□□ 0.28
TMEM54Q969K7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.81■□□□□ 0.28
TMEM54Q969K7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.81■□□□□ 0.28
TMEM54Q969K7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM54Q969K7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.81■□□□□ 0.28
TMEM54Q969K7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.81■□□□□ 0.28
TMEM54Q969K7 DGCR10-201ENST00000609839 495 ntBASIC16.81■□□□□ 0.28
TMEM54Q969K7 AC026471.5-201ENST00000615068 467 ntBASIC16.81■□□□□ 0.28
TMEM54Q969K7 REXO1L10P-201ENST00000615707 1290 ntBASIC16.81■□□□□ 0.28
TMEM54Q969K7 REXO1L12P-201ENST00000622156 912 ntBASIC16.81■□□□□ 0.28
TMEM54Q969K7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TMEM54Q969K7 AC087289.5-201ENST00000586076 3175 ntBASIC16.81■□□□□ 0.28
TMEM54Q969K7 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.81■□□□□ 0.28
TMEM54Q969K7 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM54Q969K7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM54Q969K7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TMEM54Q969K7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM54Q969K7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM54Q969K7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM54Q969K7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM54Q969K7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM54Q969K7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM54Q969K7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM54Q969K7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM54Q969K7 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TMEM54Q969K7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.8■□□□□ 0.28
TMEM54Q969K7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM54Q969K7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM54Q969K7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM54Q969K7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
TMEM54Q969K7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM54Q969K7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM54Q969K7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM54Q969K7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM54Q969K7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
TMEM54Q969K7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM54Q969K7 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM54Q969K7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.79■□□□□ 0.28
TMEM54Q969K7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TMEM54Q969K7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.79■□□□□ 0.28
TMEM54Q969K7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.79■□□□□ 0.28
TMEM54Q969K7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TMEM54Q969K7 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms