Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTP4A1Q93096 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTP4A1Q93096 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTP4A1Q93096 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PTP4A1Q93096 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTP4A1Q93096 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTP4A1Q93096 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PTP4A1Q93096 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.12■□□□□ 0.33
PTP4A1Q93096 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTP4A1Q93096 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTP4A1Q93096 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTP4A1Q93096 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTP4A1Q93096 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTP4A1Q93096 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PTP4A1Q93096 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTP4A1Q93096 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTP4A1Q93096 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTP4A1Q93096 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PTP4A1Q93096 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTP4A1Q93096 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.12■□□□□ 0.33
PTP4A1Q93096 KRT18P6-201ENST00000555540 1265 ntBASIC17.12■□□□□ 0.33
PTP4A1Q93096 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.12■□□□□ 0.33
PTP4A1Q93096 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
PTP4A1Q93096 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTP4A1Q93096 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.12■□□□□ 0.33
PTP4A1Q93096 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTP4A1Q93096 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.12■□□□□ 0.33
PTP4A1Q93096 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
PTP4A1Q93096 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTP4A1Q93096 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PTP4A1Q93096 AC079598.2-202ENST00000546624 1451 ntBASIC17.12■□□□□ 0.33
PTP4A1Q93096 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 BICD1-207ENST00000551848 1962 ntBASIC17.11■□□□□ 0.33
PTP4A1Q93096 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.11■□□□□ 0.33
PTP4A1Q93096 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PTP4A1Q93096 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.1■□□□□ 0.33
PTP4A1Q93096 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PTP4A1Q93096 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms