Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.91■■□□□ 1.58
RTF1Q92541 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
RTF1Q92541 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
RTF1Q92541 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC24.9■■□□□ 1.58
RTF1Q92541 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC24.9■■□□□ 1.58
RTF1Q92541 TBC1D3P2-202ENST00000577902 1649 ntBASIC24.9■■□□□ 1.58
RTF1Q92541 GAS2L1P1-201ENST00000420145 1480 ntBASIC24.9■■□□□ 1.58
RTF1Q92541 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC24.9■■□□□ 1.58
RTF1Q92541 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.9■■□□□ 1.58
RTF1Q92541 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RTF1Q92541 KRT8P45-201ENST00000414328 1447 ntBASIC24.9■■□□□ 1.58
RTF1Q92541 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC24.9■■□□□ 1.58
RTF1Q92541 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTF1Q92541 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTF1Q92541 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTF1Q92541 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
RTF1Q92541 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTF1Q92541 PHB2-202ENST00000440277 996 ntTSL 5 BASIC24.9■■□□□ 1.58
RTF1Q92541 NT5C-211ENST00000582170 653 ntTSL 3 BASIC24.9■■□□□ 1.58
RTF1Q92541 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RTF1Q92541 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RTF1Q92541 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC24.9■■□□□ 1.58
RTF1Q92541 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RTF1Q92541 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
RTF1Q92541 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
RTF1Q92541 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTF1Q92541 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
RTF1Q92541 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC24.9■■□□□ 1.58
RTF1Q92541 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC24.89■■□□□ 1.58
RTF1Q92541 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
RTF1Q92541 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC24.89■■□□□ 1.58
RTF1Q92541 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RTF1Q92541 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC24.89■■□□□ 1.58
RTF1Q92541 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
RTF1Q92541 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
RTF1Q92541 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.89■■□□□ 1.58
RTF1Q92541 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
RTF1Q92541 WWOX-216ENST00000569818 525 ntBASIC24.89■■□□□ 1.58
RTF1Q92541 NTF6B-201ENST00000591913 560 ntBASIC24.89■■□□□ 1.58
RTF1Q92541 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTF1Q92541 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTF1Q92541 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
RTF1Q92541 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC24.89■■□□□ 1.57
RTF1Q92541 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTF1Q92541 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTF1Q92541 AL158211.5-201ENST00000623583 2518 ntBASIC24.88■■□□□ 1.57
RTF1Q92541 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC24.88■■□□□ 1.57
RTF1Q92541 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTF1Q92541 RNF152P1-201ENST00000397754 604 ntBASIC24.88■■□□□ 1.57
RTF1Q92541 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
RTF1Q92541 YBX1P2-201ENST00000489612 999 ntBASIC24.88■■□□□ 1.57
RTF1Q92541 LTBR-211ENST00000543190 785 ntTSL 3 BASIC24.88■■□□□ 1.57
RTF1Q92541 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RTF1Q92541 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC24.88■■□□□ 1.57
RTF1Q92541 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC24.88■■□□□ 1.57
RTF1Q92541 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC24.88■■□□□ 1.57
RTF1Q92541 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTF1Q92541 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC24.88■■□□□ 1.57
RTF1Q92541 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
RTF1Q92541 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
RTF1Q92541 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTF1Q92541 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
RTF1Q92541 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
RTF1Q92541 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTF1Q92541 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTF1Q92541 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTF1Q92541 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RTF1Q92541 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC24.87■■□□□ 1.57
RTF1Q92541 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC24.87■■□□□ 1.57
RTF1Q92541 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC24.87■■□□□ 1.57
RTF1Q92541 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
RTF1Q92541 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC24.87■■□□□ 1.57
RTF1Q92541 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.87■■□□□ 1.57
RTF1Q92541 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC24.87■■□□□ 1.57
RTF1Q92541 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC24.87■■□□□ 1.57
RTF1Q92541 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC24.87■■□□□ 1.57
RTF1Q92541 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
RTF1Q92541 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RTF1Q92541 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
RTF1Q92541 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC24.86■■□□□ 1.57
RTF1Q92541 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC24.86■■□□□ 1.57
RTF1Q92541 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTF1Q92541 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTF1Q92541 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTF1Q92541 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC24.86■■□□□ 1.57
RTF1Q92541 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RTF1Q92541 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
RTF1Q92541 AC063952.2-201ENST00000498792 1227 ntBASIC24.86■■□□□ 1.57
RTF1Q92541 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC24.86■■□□□ 1.57
RTF1Q92541 AL031432.5-201ENST00000641059 760 ntBASIC24.86■■□□□ 1.57
RTF1Q92541 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
RTF1Q92541 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
RTF1Q92541 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTF1Q92541 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTF1Q92541 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
RTF1Q92541 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
RTF1Q92541 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
RTF1Q92541 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
RTF1Q92541 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC24.85■■□□□ 1.57
RTF1Q92541 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms