Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RAB40AQ8WXH6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RAB40AQ8WXH6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 AC020916.1-201ENST00000587762 1774 ntBASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RAB40AQ8WXH6 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 AL354751.1-201ENST00000412768 1863 ntBASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 UNC93B4-201ENST00000505679 747 ntBASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 AC006058.3-201ENST00000606217 1069 ntBASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RAB40AQ8WXH6 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40AQ8WXH6 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40AQ8WXH6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB40AQ8WXH6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.73■□□□□ 0.27
RAB40AQ8WXH6 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40AQ8WXH6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40AQ8WXH6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40AQ8WXH6 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RAB40AQ8WXH6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RAB40AQ8WXH6 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms