Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 AC090164.3-201ENST00000610780 2143 ntBASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
RTN4IP1Q8WWV3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 WIZP1-201ENST00000531444 2299 ntBASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 AC005332.8-201ENST00000622750 2735 ntBASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 AC018470.1-201ENST00000624790 3129 ntBASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RTN4IP1Q8WWV3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
RTN4IP1Q8WWV3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 AC018553.1-201ENST00000616682 1458 ntBASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTN4IP1Q8WWV3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms