Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TMC1Q8TDI8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
TMC1Q8TDI8 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TMC1Q8TDI8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TMC1Q8TDI8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC26.54■■□□□ 1.84
TMC1Q8TDI8 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
TMC1Q8TDI8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 ZNF815P-204ENST00000434898 1737 ntBASIC26.53■■□□□ 1.84
TMC1Q8TDI8 AC007952.6-201ENST00000573168 2673 ntBASIC26.53■■□□□ 1.84
TMC1Q8TDI8 AC003957.1-201ENST00000625108 2673 ntBASIC26.53■■□□□ 1.84
TMC1Q8TDI8 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 NME3-204ENST00000563498 920 ntTSL 2 BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
TMC1Q8TDI8 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC26.52■■□□□ 1.84
TMC1Q8TDI8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TMC1Q8TDI8 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TMC1Q8TDI8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TMC1Q8TDI8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TMC1Q8TDI8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TMC1Q8TDI8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC26.52■■□□□ 1.84
TMC1Q8TDI8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
TMC1Q8TDI8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
TMC1Q8TDI8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
TMC1Q8TDI8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC26.52■■□□□ 1.84
TMC1Q8TDI8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC26.52■■□□□ 1.84
TMC1Q8TDI8 AL353719.1-201ENST00000566847 864 ntBASIC26.52■■□□□ 1.84
TMC1Q8TDI8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
TMC1Q8TDI8 AC093484.2-201ENST00000580996 2166 ntBASIC26.52■■□□□ 1.84
TMC1Q8TDI8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC26.52■■□□□ 1.84
TMC1Q8TDI8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.84
TMC1Q8TDI8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC26.51■■□□□ 1.83
TMC1Q8TDI8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
TMC1Q8TDI8 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC26.51■■□□□ 1.83
TMC1Q8TDI8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC26.51■■□□□ 1.83
TMC1Q8TDI8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
TMC1Q8TDI8 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TMC1Q8TDI8 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
TMC1Q8TDI8 TSPY17P-201ENST00000450329 467 ntBASIC26.51■■□□□ 1.83
TMC1Q8TDI8 NTF6B-201ENST00000591913 560 ntBASIC26.51■■□□□ 1.83
TMC1Q8TDI8 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC26.51■■□□□ 1.83
TMC1Q8TDI8 AC010653.2-201ENST00000623505 997 ntBASIC26.51■■□□□ 1.83
TMC1Q8TDI8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC26.51■■□□□ 1.83
TMC1Q8TDI8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC26.51■■□□□ 1.83
TMC1Q8TDI8 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
TMC1Q8TDI8 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TMC1Q8TDI8 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 SDHAP1-207ENST00000440850 2000 ntBASIC26.5■■□□□ 1.83
TMC1Q8TDI8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 WWOX-216ENST00000569818 525 ntBASIC26.5■■□□□ 1.83
TMC1Q8TDI8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TMC1Q8TDI8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 BX664615.1-201ENST00000443558 458 ntBASIC26.49■■□□□ 1.83
TMC1Q8TDI8 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 AL138966.2-201ENST00000621997 464 ntBASIC26.49■■□□□ 1.83
TMC1Q8TDI8 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
TMC1Q8TDI8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
TMC1Q8TDI8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms