Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.21■□□□□ 0.83
UBA3Q8TBC4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
UBA3Q8TBC4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBA3Q8TBC4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBA3Q8TBC4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBA3Q8TBC4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBA3Q8TBC4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
UBA3Q8TBC4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBA3Q8TBC4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.21■□□□□ 0.83
UBA3Q8TBC4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
UBA3Q8TBC4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 UNC93B2-201ENST00000285383 730 ntBASIC20.2■□□□□ 0.82
UBA3Q8TBC4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 CRYGFP-201ENST00000418459 633 ntBASIC20.2■□□□□ 0.82
UBA3Q8TBC4 AL390955.1-201ENST00000428694 934 ntBASIC20.2■□□□□ 0.82
UBA3Q8TBC4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
UBA3Q8TBC4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
UBA3Q8TBC4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.18■□□□□ 0.82
UBA3Q8TBC4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 MIR1238-201ENST00000408483 83 ntBASIC20.18■□□□□ 0.82
UBA3Q8TBC4 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 CKBP1-201ENST00000565489 1086 ntBASIC20.18■□□□□ 0.82
UBA3Q8TBC4 DGCR10-201ENST00000609839 495 ntBASIC20.18■□□□□ 0.82
UBA3Q8TBC4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
UBA3Q8TBC4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
UBA3Q8TBC4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms