Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 C2orf69P3-201ENST00000565542 1120 ntBASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDH20Q8N6Y1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 AC145285.6-201ENST00000604632 637 ntBASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 AC010947.1-201ENST00000623454 693 ntBASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 CYP2D8P-201ENST00000433633 1490 ntBASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCDH20Q8N6Y1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDH20Q8N6Y1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 BX323043.1-201ENST00000641006 1765 ntBASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 PRSS44-201ENST00000515154 1146 ntBASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDH20Q8N6Y1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 LINC01568-207ENST00000641790 1380 ntBASIC19.44■□□□□ 0.7
PCDH20Q8N6Y1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms