Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 EMBP1-201ENST00000458200 901 ntBASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SLC44A3Q8N4M1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 TSPY19P-201ENST00000418461 509 ntBASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 CHCHD2P8-201ENST00000429873 447 ntBASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 TSPY18P-201ENST00000441642 509 ntBASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 AC009078.2-202ENST00000463353 338 ntBASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 AC079602.3-201ENST00000623931 403 ntBASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SLC44A3Q8N4M1 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 AC104417.2-201ENST00000562989 1793 ntBASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 KRT18P1-202ENST00000452408 1331 ntBASIC19.51■□□□□ 0.71
SLC44A3Q8N4M1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 AC093525.10-201ENST00000625130 1569 ntBASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 HLA-F-220ENST00000434407 884 ntBASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 AC104692.2-201ENST00000603054 253 ntBASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 AL732292.2-201ENST00000609649 430 ntBASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC44A3Q8N4M1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 AL023284.2-201ENST00000405850 579 ntBASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms