Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 KRT18P13-201ENST00000400056 1290 ntBASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
VPS13BQ7Z7G8 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
VPS13BQ7Z7G8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.77□□□□□ -0.52
VPS13BQ7Z7G8 HMGN1P19-201ENST00000436976 333 ntBASIC11.77□□□□□ -0.52
VPS13BQ7Z7G8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC11.77□□□□□ -0.52
VPS13BQ7Z7G8 AC120114.3-201ENST00000611923 658 ntBASIC11.77□□□□□ -0.52
VPS13BQ7Z7G8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC11.77□□□□□ -0.52
VPS13BQ7Z7G8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
VPS13BQ7Z7G8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
VPS13BQ7Z7G8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.52
VPS13BQ7Z7G8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VPS13BQ7Z7G8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VPS13BQ7Z7G8 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
VPS13BQ7Z7G8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
VPS13BQ7Z7G8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 SLC25A1P1-201ENST00000528351 927 ntBASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 SDHAP1-207ENST00000440850 2000 ntBASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 LBX2-AS1-202ENST00000603175 2083 ntBASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 HLA-A-201ENST00000376802 1334 ntBASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC11.77□□□□□ -0.53
VPS13BQ7Z7G8 CHCHD2P8-201ENST00000429873 447 ntBASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 MIR574-201ENST00000385209 96 ntBASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 TSSC2-201ENST00000450217 709 ntBASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 KRT16P4-201ENST00000453883 522 ntBASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 TOB2P1-201ENST00000469761 992 ntBASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 TK1-205ENST00000590862 642 ntTSL 3 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 AKR1C7P-201ENST00000305623 895 ntBASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC11.76□□□□□ -0.53
VPS13BQ7Z7G8 BX276092.5-203ENST00000456199 560 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms