Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PACS1Q6VY07 IRX1P1-201ENST00000438849 1838 ntBASIC19.28■□□□□ 0.68
PACS1Q6VY07 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PACS1Q6VY07 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PACS1Q6VY07 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
PACS1Q6VY07 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PACS1Q6VY07 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PACS1Q6VY07 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PACS1Q6VY07 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PACS1Q6VY07 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PACS1Q6VY07 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PACS1Q6VY07 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PACS1Q6VY07 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
PACS1Q6VY07 ABHD17AP1-201ENST00000358206 933 ntBASIC19.27■□□□□ 0.68
PACS1Q6VY07 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
PACS1Q6VY07 KRT16P5-201ENST00000455284 522 ntBASIC19.27■□□□□ 0.68
PACS1Q6VY07 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PACS1Q6VY07 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
PACS1Q6VY07 AC110285.5-201ENST00000611501 352 ntBASIC19.27■□□□□ 0.68
PACS1Q6VY07 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.27■□□□□ 0.68
PACS1Q6VY07 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PACS1Q6VY07 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.27■□□□□ 0.68
PACS1Q6VY07 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PACS1Q6VY07 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PACS1Q6VY07 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.27■□□□□ 0.67
PACS1Q6VY07 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
PACS1Q6VY07 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PACS1Q6VY07 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PACS1Q6VY07 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
PACS1Q6VY07 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACS1Q6VY07 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACS1Q6VY07 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACS1Q6VY07 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACS1Q6VY07 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACS1Q6VY07 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PACS1Q6VY07 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACS1Q6VY07 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
PACS1Q6VY07 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.26■□□□□ 0.67
PACS1Q6VY07 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACS1Q6VY07 PRORSD1P-201ENST00000295112 541 ntBASIC19.26■□□□□ 0.67
PACS1Q6VY07 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PACS1Q6VY07 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PACS1Q6VY07 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
PACS1Q6VY07 C1QBPP2-201ENST00000528754 825 ntBASIC19.26■□□□□ 0.67
PACS1Q6VY07 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.26■□□□□ 0.67
PACS1Q6VY07 C1QL1P1-201ENST00000568105 661 ntBASIC19.26■□□□□ 0.67
PACS1Q6VY07 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.26■□□□□ 0.67
PACS1Q6VY07 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PACS1Q6VY07 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACS1Q6VY07 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.26■□□□□ 0.67
PACS1Q6VY07 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.26■□□□□ 0.67
PACS1Q6VY07 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACS1Q6VY07 AL031598.1-201ENST00000561511 1773 ntBASIC19.26■□□□□ 0.67
PACS1Q6VY07 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACS1Q6VY07 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PACS1Q6VY07 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.26■□□□□ 0.67
PACS1Q6VY07 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.25■□□□□ 0.67
PACS1Q6VY07 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.25■□□□□ 0.67
PACS1Q6VY07 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.25■□□□□ 0.67
PACS1Q6VY07 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.25■□□□□ 0.67
PACS1Q6VY07 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PACS1Q6VY07 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.25■□□□□ 0.67
PACS1Q6VY07 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.25■□□□□ 0.67
PACS1Q6VY07 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.25■□□□□ 0.67
PACS1Q6VY07 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PACS1Q6VY07 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PACS1Q6VY07 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
PACS1Q6VY07 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.24■□□□□ 0.67
PACS1Q6VY07 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PACS1Q6VY07 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PACS1Q6VY07 AC093525.10-201ENST00000625130 1569 ntBASIC19.24■□□□□ 0.67
PACS1Q6VY07 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PACS1Q6VY07 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PACS1Q6VY07 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PACS1Q6VY07 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.24■□□□□ 0.67
PACS1Q6VY07 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.24■□□□□ 0.67
PACS1Q6VY07 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PACS1Q6VY07 RPPH1-201ENST00000516869 333 ntBASIC19.24■□□□□ 0.67
PACS1Q6VY07 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.24■□□□□ 0.67
PACS1Q6VY07 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PACS1Q6VY07 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PACS1Q6VY07 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PACS1Q6VY07 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms