Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CASC4Q6P4E1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 HLA-L-209ENST00000420110 1011 ntBASIC19.45■□□□□ 0.7
CASC4Q6P4E1 POM121L13P-201ENST00000422362 380 ntBASIC19.45■□□□□ 0.7
CASC4Q6P4E1 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.45■□□□□ 0.7
CASC4Q6P4E1 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 UNC93B5-201ENST00000530315 699 ntBASIC19.44■□□□□ 0.7
CASC4Q6P4E1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CASC4Q6P4E1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 CROCCP3-202ENST00000420820 1947 ntBASIC19.43■□□□□ 0.7
CASC4Q6P4E1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 IRX1P1-201ENST00000438849 1838 ntBASIC19.43■□□□□ 0.7
CASC4Q6P4E1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CASC4Q6P4E1 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 RNA5SP413-201ENST00000516373 109 ntBASIC19.42■□□□□ 0.7
CASC4Q6P4E1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CASC4Q6P4E1 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms