Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST2H2BCQ6DN03 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.34■□□□□ 0.21
HIST2H2BCQ6DN03 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST2H2BCQ6DN03 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.34■□□□□ 0.21
HIST2H2BCQ6DN03 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HIST2H2BCQ6DN03 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.34■□□□□ 0.21
HIST2H2BCQ6DN03 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.33■□□□□ 0.21
HIST2H2BCQ6DN03 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HIST2H2BCQ6DN03 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HIST2H2BCQ6DN03 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HIST2H2BCQ6DN03 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 METTL21AP1-201ENST00000438852 635 ntBASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 AC083906.6-201ENST00000641366 219 ntBASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 AC079781.4-201ENST00000641908 219 ntBASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 KRT18P28-201ENST00000453838 1332 ntBASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HIST2H2BCQ6DN03 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 FAM8A3P-201ENST00000427218 844 ntBASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 LHX6-205ENST00000464484 666 ntTSL 2 BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 MIR3687-2-201ENST00000577708 61 ntBASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 AC092364.2-202ENST00000597012 1073 ntBASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 AL596442.2-201ENST00000610240 980 ntBASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 AC027601.4-201ENST00000611259 610 ntBASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 MIR3687-1-201ENST00000614492 61 ntBASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 PLK5-205ENST00000642079 1969 ntBASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HIST2H2BCQ6DN03 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 AP003733.1-201ENST00000491725 852 ntBASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 AC008608.2-201ENST00000606089 416 ntBASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 AL592071.1-201ENST00000611956 408 ntBASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.31■□□□□ 0.2
HIST2H2BCQ6DN03 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2BCQ6DN03 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2BCQ6DN03 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HIST2H2BCQ6DN03 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HIST2H2BCQ6DN03 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC16.3■□□□□ 0.2
HIST2H2BCQ6DN03 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.3■□□□□ 0.2
HIST2H2BCQ6DN03 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms