Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF43Q68DV7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RNF43Q68DV7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF43Q68DV7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
RNF43Q68DV7 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF43Q68DV7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF43Q68DV7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF43Q68DV7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF43Q68DV7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.99■□□□□ 0.79
RNF43Q68DV7 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF43Q68DV7 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.99■□□□□ 0.79
RNF43Q68DV7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF43Q68DV7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF43Q68DV7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF43Q68DV7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.99■□□□□ 0.79
RNF43Q68DV7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RNF43Q68DV7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF43Q68DV7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF43Q68DV7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
RNF43Q68DV7 Z82202.1-201ENST00000623446 1880 ntBASIC19.99■□□□□ 0.79
RNF43Q68DV7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
RNF43Q68DV7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF43Q68DV7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF43Q68DV7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF43Q68DV7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF43Q68DV7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RNF43Q68DV7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF43Q68DV7 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF43Q68DV7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF43Q68DV7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF43Q68DV7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF43Q68DV7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF43Q68DV7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF43Q68DV7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF43Q68DV7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RNF43Q68DV7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
RNF43Q68DV7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF43Q68DV7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.98■□□□□ 0.79
RNF43Q68DV7 KRT18P57-201ENST00000443599 1254 ntBASIC19.98■□□□□ 0.79
RNF43Q68DV7 B3GAT3P1-201ENST00000471720 806 ntBASIC19.98■□□□□ 0.79
RNF43Q68DV7 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RNF43Q68DV7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.98■□□□□ 0.79
RNF43Q68DV7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.98■□□□□ 0.79
RNF43Q68DV7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.98■□□□□ 0.79
RNF43Q68DV7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF43Q68DV7 TREX1-205ENST00000625293 1783 ntBASIC19.98■□□□□ 0.79
RNF43Q68DV7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF43Q68DV7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RNF43Q68DV7 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF43Q68DV7 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF43Q68DV7 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.97■□□□□ 0.79
RNF43Q68DV7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RNF43Q68DV7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF43Q68DV7 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF43Q68DV7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF43Q68DV7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
RNF43Q68DV7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF43Q68DV7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
RNF43Q68DV7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF43Q68DV7 AC113347.1-201ENST00000413321 391 ntBASIC19.97■□□□□ 0.79
RNF43Q68DV7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.97■□□□□ 0.79
RNF43Q68DV7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF43Q68DV7 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
RNF43Q68DV7 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RNF43Q68DV7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF43Q68DV7 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF43Q68DV7 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF43Q68DV7 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF43Q68DV7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF43Q68DV7 FSCN1P1-201ENST00000568912 1481 ntBASIC19.97■□□□□ 0.79
RNF43Q68DV7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
RNF43Q68DV7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF43Q68DV7 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF43Q68DV7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RNF43Q68DV7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
RNF43Q68DV7 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 AC005082.1-201ENST00000413042 2259 ntBASIC19.96■□□□□ 0.79
RNF43Q68DV7 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 UNC93B2-201ENST00000285383 730 ntBASIC19.96■□□□□ 0.79
RNF43Q68DV7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 AC011506.1-201ENST00000474329 610 ntBASIC19.96■□□□□ 0.79
RNF43Q68DV7 Z85996.1-201ENST00000494644 937 ntBASIC19.96■□□□□ 0.79
RNF43Q68DV7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RNF43Q68DV7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 FITM1-202ENST00000559294 800 ntBASIC19.96■□□□□ 0.79
RNF43Q68DV7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.96■□□□□ 0.79
RNF43Q68DV7 DGCR10-201ENST00000609839 495 ntBASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms