Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PRAMEF17Q5VTA0 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 AL353719.1-201ENST00000566847 864 ntBASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 NTF6B-201ENST00000591913 560 ntBASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PRAMEF17Q5VTA0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 AL138966.2-201ENST00000621997 464 ntBASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 TREX1-205ENST00000625293 1783 ntBASIC18.17■□□□□ 0.5
PRAMEF17Q5VTA0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 AC117947.1-201ENST00000427448 529 ntBASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 AC139887.4-201ENST00000607877 719 ntBASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PRAMEF17Q5VTA0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 TSPY17P-201ENST00000450329 467 ntBASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PRAMEF17Q5VTA0 AP003041.3-201ENST00000527151 707 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms