Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
FAM78BQ5VT40 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.14■□□□□ 0.01
FAM78BQ5VT40 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FAM78BQ5VT40 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 WIZP1-201ENST00000531444 2299 ntBASIC15.13■□□□□ 0.01
FAM78BQ5VT40 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 ME3-201ENST00000323418 1068 ntTSL 5 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.13■□□□□ 0.01
FAM78BQ5VT40 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
FAM78BQ5VT40 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 NOC2LP2-201ENST00000407594 1944 ntBASIC15.12■□□□□ 0.01
FAM78BQ5VT40 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 RARRES2P4-201ENST00000514074 484 ntBASIC15.12■□□□□ 0.01
FAM78BQ5VT40 AC023632.3-201ENST00000521633 145 ntBASIC15.12■□□□□ 0.01
FAM78BQ5VT40 DUX4L16-201ENST00000555130 1264 ntBASIC15.12■□□□□ 0.01
FAM78BQ5VT40 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 AC022517.1-201ENST00000592429 346 ntBASIC15.12■□□□□ 0.01
FAM78BQ5VT40 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FAM78BQ5VT40 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.11■□□□□ 0.01
FAM78BQ5VT40 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms