Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC24.06■■□□□ 1.44
RC3H1Q5TC82 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H1Q5TC82 AC091304.2-201ENST00000564639 760 ntBASIC24.06■■□□□ 1.44
RC3H1Q5TC82 AC012615.1-201ENST00000565797 1299 ntBASIC24.06■■□□□ 1.44
RC3H1Q5TC82 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
RC3H1Q5TC82 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H1Q5TC82 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H1Q5TC82 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
RC3H1Q5TC82 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
RC3H1Q5TC82 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
RC3H1Q5TC82 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
RC3H1Q5TC82 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RC3H1Q5TC82 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
RC3H1Q5TC82 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
RC3H1Q5TC82 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
RC3H1Q5TC82 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC24.04■■□□□ 1.44
RC3H1Q5TC82 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC24.04■■□□□ 1.44
RC3H1Q5TC82 AC106795.1-205ENST00000512851 1056 ntBASIC24.04■■□□□ 1.44
RC3H1Q5TC82 AP000867.3-201ENST00000524675 377 ntBASIC24.04■■□□□ 1.44
RC3H1Q5TC82 PNN-202ENST00000553331 656 ntTSL 3 BASIC24.04■■□□□ 1.44
RC3H1Q5TC82 GXYLT1P4-201ENST00000613576 1192 ntBASIC24.04■■□□□ 1.44
RC3H1Q5TC82 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC24.04■■□□□ 1.44
RC3H1Q5TC82 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
RC3H1Q5TC82 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC24.03■■□□□ 1.44
RC3H1Q5TC82 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
RC3H1Q5TC82 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
RC3H1Q5TC82 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
RC3H1Q5TC82 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
RC3H1Q5TC82 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC24.03■■□□□ 1.44
RC3H1Q5TC82 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC24.03■■□□□ 1.44
RC3H1Q5TC82 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
RC3H1Q5TC82 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC24.03■■□□□ 1.44
RC3H1Q5TC82 LINC00265-3P-201ENST00000447588 903 ntBASIC24.03■■□□□ 1.44
RC3H1Q5TC82 AC079781.3-201ENST00000449110 356 ntBASIC24.03■■□□□ 1.44
RC3H1Q5TC82 KRT18P31-201ENST00000506277 1292 ntBASIC24.03■■□□□ 1.44
RC3H1Q5TC82 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
RC3H1Q5TC82 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RC3H1Q5TC82 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RC3H1Q5TC82 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC24.03■■□□□ 1.44
RC3H1Q5TC82 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 BAALC-202ENST00000306391 243 ntTSL 5 BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 BAALC-204ENST00000330955 222 ntTSL 5 BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC24.02■■□□□ 1.44
RC3H1Q5TC82 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 TOB2P1-201ENST00000469761 992 ntBASIC24.01■■□□□ 1.43
RC3H1Q5TC82 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 LITAF-220ENST00000620789 692 ntTSL 5 BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC24.01■■□□□ 1.43
RC3H1Q5TC82 KRT8P7-201ENST00000533003 1432 ntBASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms