Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 AC116351.2-201ENST00000606540 1585 ntBASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 AP001271.2-201ENST00000624018 1556 ntBASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ATPAF1Q5TC12 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 POU5F1P3-201ENST00000428824 1078 ntBASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 AC135050.7-201ENST00000624508 2218 ntBASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 AC018470.1-201ENST00000624790 3129 ntBASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
ATPAF1Q5TC12 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 AL121906.2-201ENST00000621597 723 ntBASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ATPAF1Q5TC12 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 MIR4651-201ENST00000582622 73 ntBASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ATPAF1Q5TC12 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.52■□□□□ 0.23
ATPAF1Q5TC12 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATPAF1Q5TC12 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
ATPAF1Q5TC12 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ATPAF1Q5TC12 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ATPAF1Q5TC12 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.52■□□□□ 0.23
ATPAF1Q5TC12 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 TFP1-202ENST00000475455 1573 ntBASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ATPAF1Q5TC12 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms