Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
LRIF1Q5T3J3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
LRIF1Q5T3J3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18■□□□□ 0.47
LRIF1Q5T3J3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
LRIF1Q5T3J3 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.98■□□□□ 0.47
LRIF1Q5T3J3 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 MAP2K4P1-201ENST00000438453 1195 ntBASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 AC098934.4-201ENST00000564127 592 ntBASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.97■□□□□ 0.47
LRIF1Q5T3J3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.96■□□□□ 0.47
LRIF1Q5T3J3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms