Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNFT1Q5M7Z0 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 AL121956.5-201ENST00000625261 221 ntBASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNFT1Q5M7Z0 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 GPAT2P1-201ENST00000444924 1672 ntBASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 PCED1CP-201ENST00000419887 785 ntBASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 NEK4P2-201ENST00000580004 1012 ntBASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNFT1Q5M7Z0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 AP000550.4-202ENST00000639755 178 ntBASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNFT1Q5M7Z0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.15■□□□□ 0.34
RNFT1Q5M7Z0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms