Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.78■□□□□ 0.44
PRICKLE4Q2TBC4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PRICKLE4Q2TBC4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PRICKLE4Q2TBC4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.78■□□□□ 0.44
PRICKLE4Q2TBC4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRICKLE4Q2TBC4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRICKLE4Q2TBC4 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PRICKLE4Q2TBC4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 AC093827.2-201ENST00000512654 315 ntBASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.77■□□□□ 0.44
PRICKLE4Q2TBC4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PRICKLE4Q2TBC4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PRICKLE4Q2TBC4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PRICKLE4Q2TBC4 AC096733.2-201ENST00000609937 1394 ntBASIC17.77■□□□□ 0.43
PRICKLE4Q2TBC4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PRICKLE4Q2TBC4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.77■□□□□ 0.43
PRICKLE4Q2TBC4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PRICKLE4Q2TBC4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 AC087289.5-201ENST00000586076 3175 ntBASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.76■□□□□ 0.43
PRICKLE4Q2TBC4 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 KRT17P2-201ENST00000300992 1314 ntBASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
PRICKLE4Q2TBC4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 UNC93B2-201ENST00000285383 730 ntBASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 RBM17P1-201ENST00000453646 1190 ntBASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 AC097488.1-201ENST00000507834 756 ntBASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 SLC25A1P4-201ENST00000567977 778 ntBASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 AC006333.2-201ENST00000607957 2099 ntBASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PRICKLE4Q2TBC4 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms