Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
CBX1P83916 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20■□□□□ 0.79
CBX1P83916 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX1P83916 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CBX1P83916 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.99■□□□□ 0.79
CBX1P83916 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
CBX1P83916 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.99■□□□□ 0.79
CBX1P83916 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CBX1P83916 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.99■□□□□ 0.79
CBX1P83916 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
CBX1P83916 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.99■□□□□ 0.79
CBX1P83916 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.99■□□□□ 0.79
CBX1P83916 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.99■□□□□ 0.79
CBX1P83916 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CBX1P83916 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CBX1P83916 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.99■□□□□ 0.79
CBX1P83916 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC19.99■□□□□ 0.79
CBX1P83916 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.99■□□□□ 0.79
CBX1P83916 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CBX1P83916 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CBX1P83916 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.99■□□□□ 0.79
CBX1P83916 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CBX1P83916 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.98■□□□□ 0.79
CBX1P83916 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CBX1P83916 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CBX1P83916 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
CBX1P83916 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.98■□□□□ 0.79
CBX1P83916 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.98■□□□□ 0.79
CBX1P83916 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.98■□□□□ 0.79
CBX1P83916 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.98■□□□□ 0.79
CBX1P83916 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.98■□□□□ 0.79
CBX1P83916 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CBX1P83916 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.98■□□□□ 0.79
CBX1P83916 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.98■□□□□ 0.79
CBX1P83916 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.98■□□□□ 0.79
CBX1P83916 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CBX1P83916 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CBX1P83916 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CBX1P83916 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.97■□□□□ 0.79
CBX1P83916 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CBX1P83916 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CBX1P83916 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CBX1P83916 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.97■□□□□ 0.79
CBX1P83916 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CBX1P83916 AC092850.2-201ENST00000623821 2697 ntBASIC19.97■□□□□ 0.79
CBX1P83916 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CBX1P83916 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
CBX1P83916 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CBX1P83916 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.97■□□□□ 0.79
CBX1P83916 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CBX1P83916 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CBX1P83916 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.97■□□□□ 0.79
CBX1P83916 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
CBX1P83916 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CBX1P83916 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CBX1P83916 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.97■□□□□ 0.79
CBX1P83916 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CBX1P83916 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CBX1P83916 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CBX1P83916 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CBX1P83916 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CBX1P83916 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CBX1P83916 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
CBX1P83916 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.96■□□□□ 0.79
CBX1P83916 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.96■□□□□ 0.79
CBX1P83916 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CBX1P83916 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CBX1P83916 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.96■□□□□ 0.79
CBX1P83916 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CBX1P83916 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CBX1P83916 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms