Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CX3CL1P78423 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CX3CL1P78423 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.37■□□□□ 0.05
CX3CL1P78423 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CX3CL1P78423 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.37■□□□□ 0.05
CX3CL1P78423 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CX3CL1P78423 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.37■□□□□ 0.05
CX3CL1P78423 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CX3CL1P78423 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CX3CL1P78423 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CX3CL1P78423 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CX3CL1P78423 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC15.37■□□□□ 0.05
CX3CL1P78423 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
CX3CL1P78423 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CX3CL1P78423 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.36■□□□□ 0.05
CX3CL1P78423 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC15.36■□□□□ 0.05
CX3CL1P78423 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CX3CL1P78423 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CX3CL1P78423 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CX3CL1P78423 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.36■□□□□ 0.05
CX3CL1P78423 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC15.36■□□□□ 0.05
CX3CL1P78423 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.36■□□□□ 0.05
CX3CL1P78423 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC15.36■□□□□ 0.05
CX3CL1P78423 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.36■□□□□ 0.05
CX3CL1P78423 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
CX3CL1P78423 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.36■□□□□ 0.05
CX3CL1P78423 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.36■□□□□ 0.05
CX3CL1P78423 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC15.36■□□□□ 0.05
CX3CL1P78423 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.36■□□□□ 0.05
CX3CL1P78423 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.36■□□□□ 0.05
CX3CL1P78423 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
CX3CL1P78423 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 AC090340.1-201ENST00000620778 4980 ntBASIC15.36■□□□□ 0.05
CX3CL1P78423 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
CX3CL1P78423 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
CX3CL1P78423 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CX3CL1P78423 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.36■□□□□ 0.05
CX3CL1P78423 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CX3CL1P78423 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CX3CL1P78423 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.35■□□□□ 0.05
CX3CL1P78423 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC15.35■□□□□ 0.05
CX3CL1P78423 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
CX3CL1P78423 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CX3CL1P78423 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.35■□□□□ 0.05
CX3CL1P78423 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
CX3CL1P78423 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 AL158047.1-201ENST00000445918 881 ntBASIC15.35■□□□□ 0.05
CX3CL1P78423 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.35■□□□□ 0.05
CX3CL1P78423 AC098590.1-201ENST00000468126 897 ntBASIC15.35■□□□□ 0.05
CX3CL1P78423 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.35■□□□□ 0.05
CX3CL1P78423 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC15.35■□□□□ 0.05
CX3CL1P78423 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.35■□□□□ 0.05
CX3CL1P78423 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.35■□□□□ 0.05
CX3CL1P78423 SPIB-206ENST00000596074 847 ntTSL 2 BASIC15.35■□□□□ 0.05
CX3CL1P78423 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.35■□□□□ 0.05
CX3CL1P78423 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC15.35■□□□□ 0.05
CX3CL1P78423 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.35■□□□□ 0.05
CX3CL1P78423 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.35■□□□□ 0.05
CX3CL1P78423 AL032819.2-201ENST00000624543 2162 ntBASIC15.35■□□□□ 0.05
CX3CL1P78423 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.35■□□□□ 0.05
CX3CL1P78423 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC15.35■□□□□ 0.05
CX3CL1P78423 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.35■□□□□ 0.05
CX3CL1P78423 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CX3CL1P78423 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CX3CL1P78423 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.35■□□□□ 0.05
CX3CL1P78423 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CX3CL1P78423 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CX3CL1P78423 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.34■□□□□ 0.05
CX3CL1P78423 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CX3CL1P78423 AC104417.2-201ENST00000562989 1793 ntBASIC15.34■□□□□ 0.05
CX3CL1P78423 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms