Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.23■□□□□ 0.67
PRAMEP78395 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.23■□□□□ 0.67
PRAMEP78395 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEP78395 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEP78395 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEP78395 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PRAMEP78395 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
PRAMEP78395 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEP78395 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEP78395 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEP78395 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEP78395 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEP78395 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PRAMEP78395 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.23■□□□□ 0.67
PRAMEP78395 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEP78395 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEP78395 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEP78395 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEP78395 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEP78395 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEP78395 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEP78395 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEP78395 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEP78395 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEP78395 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEP78395 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEP78395 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRAMEP78395 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEP78395 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PRAMEP78395 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PRAMEP78395 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.22■□□□□ 0.67
PRAMEP78395 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.22■□□□□ 0.67
PRAMEP78395 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEP78395 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.22■□□□□ 0.67
PRAMEP78395 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
PRAMEP78395 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
PRAMEP78395 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PRAMEP78395 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PRAMEP78395 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
PRAMEP78395 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.22■□□□□ 0.67
PRAMEP78395 TNXA-203ENST00000507684 2038 ntBASIC19.22■□□□□ 0.67
PRAMEP78395 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEP78395 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEP78395 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEP78395 BCL2-203ENST00000589955 5011 ntBASIC19.21■□□□□ 0.67
PRAMEP78395 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEP78395 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEP78395 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEP78395 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEP78395 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEP78395 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.21■□□□□ 0.67
PRAMEP78395 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEP78395 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PRAMEP78395 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.21■□□□□ 0.67
PRAMEP78395 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEP78395 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.21■□□□□ 0.67
PRAMEP78395 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PRAMEP78395 AC004408.2-201ENST00000623613 2777 ntBASIC19.21■□□□□ 0.67
PRAMEP78395 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEP78395 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PRAMEP78395 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEP78395 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.21■□□□□ 0.67
PRAMEP78395 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEP78395 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEP78395 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEP78395 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.21■□□□□ 0.67
PRAMEP78395 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
PRAMEP78395 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PRAMEP78395 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.2■□□□□ 0.66
PRAMEP78395 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PRAMEP78395 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PRAMEP78395 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PRAMEP78395 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PRAMEP78395 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PRAMEP78395 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 AL049812.1-201ENST00000432563 2267 ntBASIC19.2■□□□□ 0.66
PRAMEP78395 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PRAMEP78395 KRT18P29-201ENST00000397031 1267 ntBASIC19.2■□□□□ 0.66
PRAMEP78395 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 TSPY20P-201ENST00000450910 630 ntBASIC19.2■□□□□ 0.66
PRAMEP78395 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.2■□□□□ 0.66
PRAMEP78395 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.2■□□□□ 0.66
PRAMEP78395 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PRAMEP78395 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PRAMEP78395 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PRAMEP78395 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms