Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC61A1P61619 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
SEC61A1P61619 AC124283.5-201ENST00000624661 1809 ntBASIC16.68■□□□□ 0.26
SEC61A1P61619 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC61A1P61619 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC61A1P61619 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SEC61A1P61619 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
SEC61A1P61619 PTBP1P-201ENST00000554374 1601 ntBASIC16.67■□□□□ 0.26
SEC61A1P61619 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.67■□□□□ 0.26
SEC61A1P61619 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SEC61A1P61619 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.67■□□□□ 0.26
SEC61A1P61619 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
SEC61A1P61619 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.67■□□□□ 0.26
SEC61A1P61619 RPPH1-201ENST00000516869 333 ntBASIC16.67■□□□□ 0.26
SEC61A1P61619 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.67■□□□□ 0.26
SEC61A1P61619 RN7SL471P-201ENST00000580476 299 ntBASIC16.67■□□□□ 0.26
SEC61A1P61619 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC16.67■□□□□ 0.26
SEC61A1P61619 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
SEC61A1P61619 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.67■□□□□ 0.26
SEC61A1P61619 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SEC61A1P61619 AL133373.2-201ENST00000623187 2828 ntBASIC16.66■□□□□ 0.26
SEC61A1P61619 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC16.66■□□□□ 0.26
SEC61A1P61619 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.66■□□□□ 0.26
SEC61A1P61619 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61A1P61619 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61A1P61619 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SEC61A1P61619 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61A1P61619 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61A1P61619 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61A1P61619 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61A1P61619 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61A1P61619 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SEC61A1P61619 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SEC61A1P61619 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SEC61A1P61619 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.66■□□□□ 0.26
SEC61A1P61619 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
SEC61A1P61619 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.66■□□□□ 0.26
SEC61A1P61619 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61A1P61619 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61A1P61619 AC023632.3-201ENST00000521633 145 ntBASIC16.66■□□□□ 0.26
SEC61A1P61619 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.66■□□□□ 0.26
SEC61A1P61619 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.66■□□□□ 0.26
SEC61A1P61619 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC16.66■□□□□ 0.26
SEC61A1P61619 FAM197Y4-202ENST00000622692 608 ntBASIC16.66■□□□□ 0.26
SEC61A1P61619 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61A1P61619 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.66■□□□□ 0.26
SEC61A1P61619 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61A1P61619 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61A1P61619 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61A1P61619 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61A1P61619 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.66■□□□□ 0.26
SEC61A1P61619 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SEC61A1P61619 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SEC61A1P61619 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SEC61A1P61619 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC61A1P61619 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SEC61A1P61619 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SEC61A1P61619 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SEC61A1P61619 MOK-225ENST00000522867 1883 ntTSL 5 BASIC16.65■□□□□ 0.26
SEC61A1P61619 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC61A1P61619 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.65■□□□□ 0.26
SEC61A1P61619 AC135050.7-201ENST00000624508 2218 ntBASIC16.65■□□□□ 0.26
SEC61A1P61619 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SEC61A1P61619 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SEC61A1P61619 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC61A1P61619 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SEC61A1P61619 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC61A1P61619 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC61A1P61619 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC61A1P61619 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.65■□□□□ 0.26
SEC61A1P61619 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.65■□□□□ 0.26
SEC61A1P61619 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
SEC61A1P61619 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC61A1P61619 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SEC61A1P61619 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SEC61A1P61619 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SEC61A1P61619 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SEC61A1P61619 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SEC61A1P61619 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SEC61A1P61619 AC104581.1-202ENST00000635932 2618 ntBASIC16.65■□□□□ 0.26
SEC61A1P61619 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SEC61A1P61619 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms